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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs9831609 chr3:74584605 G/T 7.18E-5 490 15.67 17.03 16.4 KM Plot
THCA rs9831620 chr3:100636843 C/T 2.69E-9 488 15.83 16.63 9.22 KM Plot
THCA rs9840456 chr3:155617900 G/A 0.000207 487 9 14.63 16.57 KM Plot
THCA rs9843102 chr3:100650929 G/A 2.66E-10 483 15.83 16.63 11.98 KM Plot
THCA rs9843299 chr3:52137469 G/T 8.21E-5 483 16.07 14.8 17.72 KM Plot
THCA rs9847485 chr3:100639697 C/T 2.5E-9 489 15.83 16.82 9.22 KM Plot
THCA rs9847900 chr3:127661072 A/T 0 490 16.37 14.82 6.03 KM Plot
THCA rs9870705 chr3:127679689 T/G 0 487 16.37 14.93 6.03 KM Plot
THCA rs9871915 chr3:127683440 G/A 0 487 16.37 14.93 6.03 KM Plot
THCA rs9882775 chr3:52149649 C/T 8.21E-5 483 16.07 14.8 17.72 KM Plot
THCA rs9888266 chr11:93651355 C/T 0.000219 490 16.63 17.7 15.17 KM Plot
THCA rs9892222 chr17:57373266 T/C 1.23E-6 479 15.9 15.83 14.5 KM Plot
THCA rs989928 chr1:166868067 T/C 0.000225 486 22.7 16.3 15.17 KM Plot
THCA rs9912846 chr17:2882980 C/T 0.000208 478 16.13 16.37 10.8 KM Plot
THCA rs9912907 chr17:80406303 C/T 2.45E-5 470 16.27 15.47 9.17 KM Plot